1. The DNA ligase enzyme that is frequently used to ligate different DNA fragments in order to generate rDNA molecules is isolated from: 1
2. Protein Efficiency Ratio (PER) is used as a measure of growth expressed in terms of: 1
3. At the end of one cycle of PCR, two DNA molecules will become _______. 1
4. Single base difference in ApoE gene is associated with: 1
5. One of the carbon sources used in microbial cell culture is: 1
6. A biotechnologist wants to obtain a gene sequence in single-stranded form. Which bacteriophage-based vector should he choose to obtain the desired result? 1
7. Absence of the enzyme adenosine deaminase in humans causes: 1
8. The technique to isolate and grow human embryonic stem cells in culture was developed by: 1
9. Gene prediction for bacterial genomes can be done by using the computer program _______. 1
10. _______ can be categorized as a food source of nutraceutical proteins. 1
11. Identification of disease-specific proteins can be done by using the approach of: 1
12. Herceptin is a monoclonal antibody approved for: 1
For Questions 13 to 16, two statements are given – one labelled Assertion (A) and other labelled Reason (R). Select the correct answer to these questions from the codes (A), (B), (C), and (D) as given below :
13. Assertion (A): CO2 incubators prevent the desiccation of the animal cell culture medium.
Reason (R): A pan of water is kept at all times in a CO2 incubator chamber to maintain high relative humidity. 1
Ans: (A) Both Assertion (A) and Reason (R) are true, and the Reason (R) is the correct explanation of the Assertion (A).
14. Assertion (A): Contact inhibition is absent in cancer cells.
Reason (R): Normal cells stop growing when they reach the walls of the container.
Ans: (B) Both Assertion (A) and Reason (R) are true, but the Reason (R) is not the correct explanation of the Assertion (A).
15. Assertion (A): Proteins have diverse functions.
Reason (R): All proteins are enzymes. 1
Ans: (C) Assertion (A) is true, but Reason (R) is false.
16. Assertion (A): One of the first attempts to study the molecular basis of sickle cell anaemia was to compare the electrophoretic mobility of normal haemoglobin (Hb) and sickle cell haemoglobin (scHb).
Reason (R): Sickle cell haemoglobin (scHb) moved faster than normal haemoglobin (Hb) in electrophoresis. 1
Ans: (C) Assertion (A) is true, but Reason (R) is false.
17. (a) What is the principle of mass spectrometry? Write its important application. 2
Ans: (a) Principle: Mass spectrometry determines the molecular weight of chemical compounds by separating molecular ions according to their mass/charge (m/ z) ratio.
Application: To obtain protein structural information, such as peptide mass / amino acid sequence/ to identify the type and location of amino acid modification within proteins/ to provide the molecular weight of proteins. (any one )
OR
(b) Describe briefly the charge relay system that operates in chymotrypsin enzyme. 2
Ans: (b) The enzyme chymotrypsin is made up of a linear chain of 245 amino acids interrupted into three peptides. The protein folds into a globular structure, and the three important amino acid residues His(57), Asp(102), and Ser(195) come close together in space, which allows a ‘charge relay system’ to operate. The negatively charged aspartate (102) can form a hydrogen bond with the adjacent histidine (57), partially borrowing a hydrogen ion from the latter. The His (57) makes good its partial hydrogen ion loss to Asp(102) by attracting a hydrogen ion from the adjacent Ser(195) through the His(57) residue, making Ser(195) acidic.
18. With a suitable example, explain briefly why the number of predicted genes do not correlate with the genome size and the number of chromosomes in an organism. 2
Ans:
No correlation exists between the number of predicted genes, the genome size, and the number of chromosomes in an organism due to overlapping genes, splice variants.
19. Why is chronic myelogenous leukaemia caused? Name the technique used to know the status of this disease. 2
Ans: – Chronic myelogenous leukemia is caused due to 9 – 22 translocation in the chromosome, resulting in a shorter chromosome 22 (Philadelphia chromosome)
– Fluorescence In situ Hybridisation Technique/ Karyotype analysis (any one)
Alternative Question for Visually Impaired in lieu of Q. No. 19.
19. What are the uses of the data provided in RefSeq database ? 2
Ans: The uses of the data provided in the RefSeq database are:
1. Designing gene chips.
2. Describing the sequence features of the human genome.
20. Outline the important steps for isolation of recombinant insulin (Humulin) from Escherichia coli. 2
Ans: -Steps for isolation of recombinant Insulin (Humulin) from Escherichia coli
21. What is the most common cause of foaming in microbial culture medium? Which problems are created by foaming in microbiological processes? 2
Ans: – The Common cause of foaming in microbial culture medium is the presence of proteins in the culture medium.
– Foaming denatures proteins and provides a hindrance to the free diffusion of oxygen in the medium.
22. Elaborate upon the scientific relevance for therapeutic usefulness of whey with specific examples. 3
Ans: – Whey proteins result in the elevation of tripeptide glutathione (gamma-glutamyl cysteinyl glycine) in cells. Glutathione is a reducing compound that detoxifies xenobiotics and protects cellular components from the effects of oxygen intermediates and free radicals
-Examples: Whey is used to treat various illnesses like jaundice, infected skin lesions, and genitourinary tract infections. (Any two examples.)
23. (a) Mention the important features that were incorporated in each of the following vectors: 3
Ans: (a) Important features that were incorporated in each of the following vectors are :
OR
(b) Explain the method of Blue-White selection used for screening of recombinant cells containing desired plasmid with gene of interest. 3
Ans:
24. What is the mode of action of tissue Plasminogen Activator (tPA)? Draw a schematic representation to show the method of production of tPA through mammalian cell culture. 3
Ans: – Mode of action of tissue Plasminogen Activator (tPA):
tPA converts plasminogen to plasmin, which dissolves blood clots. /
Schematic representation to show the method of production of tPA through mammalian cell culture.
Alternative Question for Visually Impaired in lieu of Q. No. 24
24. What are stem cells? Write the two broad types of mammalian stem cells and an application of each. 3
Ans:
Application of Embryonic stem cells –
25. Although not required for cell growth, antibiotics are added to animal cell culture medium. Give reason. Name two such antibiotics. 3
Ans: Antibiotics are added to animal cell culture medium to control the growth of bacterial and fungal contaminants.
– Two such antibiotics are Penicillin and Streptomycin
26. It is very difficult to produce hybrids in case of interspecific and intergeneric crosses. Why? Briefly describe the technique to obtain such novel hybrids. 3
Ans:
27. Transgenic plants can be used as factories to produce polyhydroxybutyrate (PHB) on a large scale. How was Arabidopsis plant engineered for the same? State the drawback of producing PHB by fermentation using bacterium Alcaligenes eutrophus. 3
Ans:
28. A comparative microarray hybridisation experiment was performed between normal and cancerous cells. How will you interpret the result obtained on a microarray if red and green coloured fluors were used for labelling the cDNA probes of normal and cancerous cells, respectively? 3
Ans:
Instructions: Q. Nos. 29 and 30 are case-based questions. Each of these questions has sub-parts [(i), (ii), and (iii)] with internal choice in one sub-part.
29. Sanger’s method of DNA sequencing is a widely used technique to determine the nucleotide sequence of a DNA fragment. Primers are extended using the single-strand DNA template as a guide, where the normal substrates, i.e., deoxynucleotide 5′ triphosphates (dNTPs), are incorporated in the growing DNA chain. This method is based upon the principle of chain termination by ddNTPs (2′, 3′ dideoxynucleotide triphosphates), which, if incorporated into each extending chain (instead of the required dNTP), cause termination. Radioactive primers may be used to visualise separated strands in the gel by autoradiography. Nowadays, DNA sequencing has become automated, where ddNTPs are conjugated with fluorescent molecules, and the gels obtained are scanned by laser.
(i) Why are primers required in Sanger’s method of DNA sequencing? 1
Ans: (i) Only primers can be extended using a single-stranded DNA template as a guide.
(ii) Write the difference between dNTPs and ddNTPs. What is the function of ddNTPs in Sanger’s method of DNA sequencing ? 2
Ans: (ii) The 3′OH group is present in dNTPs, whereas the 3′OH group is absent in ddNTPs (Structures indicating correct labeling at 3’ positions of dNTP and ddNTP can be considered.
Function:- ddNTPs terminate the growing DNA chain where they are incorporated.
(iii) What is the advantage of using ddNTPs conjugated with fluorescent molecules in automated method of DNA sequencing? 1
Ans: (iii) Advantage:- Gels can be scanned by Laser / Danger of using radioisotopes is avoided / Single lane gel electrophoresis can be conducted instead of four lane gel. (Any one ).
OR
(iii) Which enzyme is used in Sanger’s method of DNA sequencing? 1
Ans: (iii) DNA Polymerase
30. Genetically modified or transgenic crops with improved agronomic traits have been developed by the introduction of foreign genes into crop plants, using cell and tissue culture systems. The explants are cultured on a suitable nutrient medium which provides macronutrients, micronutrients, carbon source, vitamins, amino acids, along with plant hormones required for growth, cell division, and development of plant cells in culture. Plant cell culture and applications deal with various types of cultures, such as organ culture, explant culture, callus culture, cell suspension culture, protoplast culture, mass cell culture, and each of these has widespread uses in plant regeneration, genetic transformation studies, and many more applications of plant cell and tissue culture.
(i) What is meant by explant culture? 1
Ans: (i) The culture of any piece or a part of a plant (explant) is known as explant culture.
(ii) Mention hormones that are used for promoting growth and cell division of plant cells in culture. 2
Ans: (ii) Auxin / Cytokinin / [Gibberellin] (any two)
(iii) What is meant by “Protoplast” ? 1
Ans: (iii) Plant cells without a cell wall are known as “ Protoplast”
OR
(iii) Write an application of callus culture. 1
Ans: (iii) Micropropagation / Plant Regeneration / Preparation of single cell suspensions/ Preparation of protoplasts / Genetic transformation studies. (Any one )
31. (a) Explain the technique of peptide mapping used to compare normal haemoglobin with sickle cell haemoglobin. 5
Ans: (a) The technique of peptide mapping used to compare normal haemoglobin with sickle cell haemoglobin:-
OR
(b) Mention any five protein-based products with an example of each. 5
Ans: Any five protein-based products as given below, with one example of each:-
32. (a) Describe the basic steps of Recombinant DNA Technology. 5
Ans: (a) The Basic steps of Recombinant DNA Technology are:-
Flowchart with explanation of basic steps of Recombinant DNA Technology
OR
(b) Describe the procedure involved in Restriction Fragment Length Polymorphism (RFLP) technique. Why is this technique used in forensic sciences ? 5
Ans: (b) Procedure involved in Restriction Fragment Length Polymorphism (RFLP)
Technique:-
Flowchart with explanation of steps
33. (a) What is a “metagenome”? Describe the metagenomics approach and write its importance to study microorganisms. 5
Ans: The genomes contributed by both the culturable and the non-culturable varieties of microbes together are termed as ‘metagenome’.
Metagenomics approach:-
Importance of metagenomics approach to study microorganisms is:-
To cast a wider net on microbial resources present in the environment / to fish out genes of interest / to analyze the genomes of the microbes without culturing them in the laboratory / to study those microbes that are difficult to culture in the laboratory or have never been cultured in the laboratory as yet / analyze these microbes to see if they carry any genes which may be exploited for human use.
OR
(b) How is a continuous culture system maintained in microbial culture? What are its advantages over Fed-batch culture? 5
Ans: – In Continuous culture, the growth medium is designed in such a way that one of the nutrients is in limited quantity. Thus, during the exponential growth just before the nutrient is fully exhausted, fresh medium containing the limited nutrient is added, and this is repeated every time the limited nutrient is about to be exhausted.
Advantages of Continuous culture over Fed-batch culture:-
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